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    Meet the man who combines science, technology and magic to understand proteins

    enJune 18, 2024

    Podcast Summary

    • Protein studies and magicDr. Parag Malik's team is developing a machine, referred to as a 'magic box,' that could revolutionize biomedicine by allowing for more detailed protein studies, leading to potential drug targets and new treatments.

      Science and magic might not be as different as we think. Dr. Parag Malik, an associate professor at Stanford University and founder of Nautilus Biotech, is a scientist, researcher, and magician. His team is developing a machine that could revolutionize biomedicine by allowing for more detailed protein studies. Proteins are the material that drives all biological functions, and the proteome is the complete collection of all proteins in a system. Currently, 95% of approved drugs target proteins, and imbalances in protein levels can lead to diseases. However, measuring the entire proteome in a single experiment has been a challenge. By understanding the proteome, researchers can identify potential drug targets and develop new treatments. This cutting-edge technology, which Malik refers to as a "magic box," is set to debut later this year. It's an exciting time for science, where the lines between disciplines blur, and innovation comes from unexpected places.

    • Proteome measurement technologyNautilus Biotech is developing a new technology to measure the proteome easily, sensitively, and routinely, bringing us closer to understanding health and disease.

      The proteome, a collection of all the proteins in an organism, is crucial for understanding health and disease, but current technology limitations prevent us from fully mapping it. Nautilus Biotech is developing a new technology to measure the proteome easily, sensitively, and routinely. Magician Parag Malik, a Stanford professor involved in the project, brings a unique perspective from his background in both science and magic. He emphasizes the importance of being aware of cognitive biases and maintaining a healthy disregard for the impossible when tackling challenging scientific projects. The prototype of Nautilus' instrument stands before us, marking a significant step towards unlocking the mysteries of the proteome.

    • Proteome analysis instrumentA compact, user-friendly proteome analysis instrument enables comprehensive analysis of all proteins in a sample, potentially leading to earlier and more accurate diagnoses.

      The black and blue box discussed is a revolutionary instrument designed to make proteome analysis accessible to any biologist. With a size comparable to a washing machine, it sits on a standard lab bench and offers ease of use. Its primary function is to identify and quantify all proteins present in a sample, be it a drop of blood or cancer cells. With this information, researchers can determine if certain proteins, like PSA for prostate cancer, are present in abnormal levels, potentially leading to earlier and more accurate diagnoses. The user interacts with the touch screen, where the instrument greets them and asks about the type of study they wish to conduct. Its goal is to enable comprehensive proteome analysis at a depth and sensitivity previously unattainable, making significant strides in medical research.

    • Protein identification technologyAdvanced protein identification technology uses nanofabricated flow cells with magnetic and temperature-controlled systems to hold billions of protein molecules and identify them using antibodies and machine learning software.

      This advanced technology uses nanofabricated flow cells, capable of holding billions of protein molecules, to identify proteins through a process involving specialized reagents and machine learning software. The user loads their samples onto the flow cells, which have a magnetic and temperature-controlled system to ensure proper placement. The magic comes from the use of antibodies that recognize specific protein sequences, working in conjunction with the system and software to identify the proteins. This technology, with its potential to analyze vast numbers of proteins, could have significant implications for various industries and research fields, eventually reaching the public through various applications.

    • Dark proteome, earlier disease detectionUnderstanding the dark proteome will enable earlier disease detection through routine blood tests and lead to more affordable therapeutics, making treatments available for a wider range of people.

      Advancements in understanding the dark proteome, previously unmeasurable proteins, will lead to earlier disease detection through routine blood tests and more affordable therapeutics. This could potentially make treatments available for diseases currently considered untargetable or affecting small populations due to high development costs. Parag Malik from Nautilus Biotech discussed how this could revolutionize healthcare by catching diseases earlier and reducing the cost of medication development. This could ultimately provide more treatments for a wider range of people.

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